It is interesting, for instance in the log you see that in one study you have images of a male and female patient - this must be incorrect. The conquest warnings indicate it database will be 'confused', a study belong to one patient and can have only one sex. Have a look at the one with *** which are more of a problem:
***Truncated FrameOfRef -- this is a UID which is max 64 characters but it is passed 88
***Inconsistent PatientBir -- could be scans of the different patients mixed
*** connection terminated -- aborted a transfer on the scanner?
So no big worries but I have the impression your scanner data is a mess.